MLOC_60769 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.304121.821751.665741.59877
LEAShoots from the seedlings (10 cm shoot stage)0.27430300.07184480.165845
INF1Young developing inflorescences (5mm)0.3050640.5993270.3098270.27123
INF2Developing inflorescences (1-1.5 cm)0.441050.4434040.2173280.365682
ROORoots from the seedlings (10 cm shoot stage)2.455192.443992.599292.39067
NODDeveloping tillers at six leaf stage, 3rd internode00.1341170.2058040.611093
CAR5Developing grain, bracts removed (5 DPA)1.421921.457281.910551.18839
CAR15Developing grain, bracts removed (15 DPA)2.546052.048352.634664.22197



CDS Structure of MLOC_60769






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60769.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60769.5CUST_8321_PI427708083AvailableAvailablecontig_44760 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01610.1 -3 0.0 563 287/323 (89%) 13108.m00084 protein DUF250 domain containing protein, putative, expressed
TAIR PP10 AT2G13650.3 -3 5e-154 445 230/315 (73%) | Symbols: GONST1 | golgi nucleotide sugar transporter 1 | chr2:5687584-5690303 REVERSE LENGTH=333