MLOC_60750 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.288961.244271.585851.57173
LEAShoots from the seedlings (10 cm shoot stage)1.993990.5856560.9262830.911077
INF1Young developing inflorescences (5mm)0.8958930.6786670.6679730.625972
INF2Developing inflorescences (1-1.5 cm)0.4451490.7214240.5598360.640573
ROORoots from the seedlings (10 cm shoot stage)2.734661.861491.352151.80207
NODDeveloping tillers at six leaf stage, 3rd internode3.453695.721233.233878.64483
CAR5Developing grain, bracts removed (5 DPA)1.099471.005881.028871.01165
CAR15Developing grain, bracts removed (15 DPA)0.3026980.2672380.2006570.627066



CDS Structure of MLOC_60750






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60750.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372948NoneNoneNoneNone
MLOC_60750.1CUST_4345_PI427708080AvailableAvailablecontig_44728 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65490.1 -3 7e-176 535 269/393 (68%) 13101.m07076 protein DNA binding protein, putative, expressed
TAIR PP10 AT1G10280.1 -3 1e-131 417 192/308 (62%) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr1:3366795-3368739 REVERSE LENGTH=412