- Predicted Gene MLOC_60750
MLOC_60750 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.28896 | 1.24427 | 1.58585 | 1.57173 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.99399 | 0.585656 | 0.926283 | 0.911077 |
INF1 | Young developing inflorescences (5mm) | 0.895893 | 0.678667 | 0.667973 | 0.625972 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.445149 | 0.721424 | 0.559836 | 0.640573 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.73466 | 1.86149 | 1.35215 | 1.80207 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.45369 | 5.72123 | 3.23387 | 8.64483 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.09947 | 1.00588 | 1.02887 | 1.01165 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.302698 | 0.267238 | 0.200657 | 0.627066 |
CDS Structure of MLOC_60750
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60750.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g65490.1 |
-3 |
7e-176 |
535 |
269/393 (68%) |
13101.m07076 protein DNA binding protein, putative, expressed |
TAIR PP10 |
AT1G10280.1 |
-3 |
1e-131 |
417 |
192/308 (62%) |
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr1:3366795-3368739 REVERSE LENGTH=412 |