MLOC_60749 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.090227.657337.651898.61684
LEAShoots from the seedlings (10 cm shoot stage)14.21875.249894.947756.96771
INF1Young developing inflorescences (5mm)5.024095.906274.296024.9771
INF2Developing inflorescences (1-1.5 cm)5.106643.827994.269645.43668
ROORoots from the seedlings (10 cm shoot stage)13.694814.561916.930420.037
NODDeveloping tillers at six leaf stage, 3rd internode54.17644.909138.6026148.472
CAR5Developing grain, bracts removed (5 DPA)6.988156.63317.318488.05384
CAR15Developing grain, bracts removed (15 DPA)3.09552.574423.302477.9206



CDS Structure of MLOC_60749






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60749.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60749.2CUST_14179_PI427708080AvailableAvailablecontig_44728 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65480.1 +2 3e-163 473 255/319 (80%) 13101.m07075 protein dnaJ domain containing protein, expressed
TAIR PP10 AT3G08910.1 +2 3e-56 194 130/321 (40%) DNAJ heat shock family protein | chr3:2710402-2711811 REVERSE LENGTH=323