- Predicted Gene MLOC_60749
MLOC_60749 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.09022 | 7.65733 | 7.65189 | 8.61684 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.2187 | 5.24989 | 4.94775 | 6.96771 |
INF1 | Young developing inflorescences (5mm) | 5.02409 | 5.90627 | 4.29602 | 4.9771 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.10664 | 3.82799 | 4.26964 | 5.43668 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.6948 | 14.5619 | 16.9304 | 20.037 |
NOD | Developing tillers at six leaf stage, 3rd internode | 54.176 | 44.9091 | 38.6026 | 148.472 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.98815 | 6.6331 | 7.31848 | 8.05384 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.0955 | 2.57442 | 3.30247 | 7.9206 |
CDS Structure of MLOC_60749
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60749.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g65480.1 |
+2 |
3e-163 |
473 |
255/319 (80%) |
13101.m07075 protein dnaJ domain containing protein, expressed |
TAIR PP10 |
AT3G08910.1 |
+2 |
3e-56 |
194 |
130/321 (40%) |
DNAJ heat shock family protein | chr3:2710402-2711811 REVERSE LENGTH=323 |