MLOC_60747 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.295511.56848.5544411.6725
LEAShoots from the seedlings (10 cm shoot stage)7.132216.288329.288776.56223
INF1Young developing inflorescences (5mm)8.206848.182269.975628.43473
INF2Developing inflorescences (1-1.5 cm)7.680086.52829.056389.44079
ROORoots from the seedlings (10 cm shoot stage)18.238110.942815.886415.4173
NODDeveloping tillers at six leaf stage, 3rd internode4.672056.017688.9865620.926
CAR5Developing grain, bracts removed (5 DPA)2.963224.49993.372254.1995
CAR15Developing grain, bracts removed (15 DPA)4.652332.999193.6141410.1145



CDS Structure of MLOC_60747






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60747.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370784NoneNoneNoneNone
MLOC_60747.1CUST_4344_PI427708080AvailableAvailablecontig_44726 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g23370.2 -3 1e-78 241 109/137 (80%) 13109.m02207 protein proline-rich protein 6, putative, expressed
TAIR PP10 AT5G16940.2 -3 2e-61 196 83/129 (64%) carbon-sulfur lyases | chr5:5571797-5572204 REVERSE LENGTH=135