- Predicted Gene MLOC_60734
MLOC_60734 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 27.5804 | 15.3018 | 16.6935 | 18.3791 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.7571 | 20.191 | 37.1031 | 22.2586 |
INF1 | Young developing inflorescences (5mm) | 29.1294 | 47.2935 | 45.5446 | 34.8328 |
INF2 | Developing inflorescences (1-1.5 cm) | 17.4042 | 17.2209 | 21.0823 | 19.3826 |
ROO | Roots from the seedlings (10 cm shoot stage) | 51.6655 | 43.275 | 53.9357 | 53.3542 |
NOD | Developing tillers at six leaf stage, 3rd internode | 54.7787 | 48.0259 | 19.469 | 149.727 |
CAR5 | Developing grain, bracts removed (5 DPA) | 47.0302 | 43.0366 | 51.2787 | 44.1256 |
CAR15 | Developing grain, bracts removed (15 DPA) | 20.1948 | 16.0884 | 18.0467 | 41.4901 |
CDS Structure of MLOC_60734
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60734.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g10480.4 |
-3 |
1e-18 |
87 |
42/45 (93%) |
13111.m01114 protein dehydrogenase, putative, expressed |
TAIR PP10 |
AT1G77120.1 |
-3 |
1e-14 |
76 |
36/44 (82%) |
| Symbols: ADH1, ADH, ATADH, ATADH1 | alcohol dehydrogenase 1 | chr1:28975509-28977216 FORWARD LENGTH=379 |