MLOC_60721 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.468828.455227.724126.559
LEAShoots from the seedlings (10 cm shoot stage)11.553716.306934.820517.4302
INF1Young developing inflorescences (5mm)1.838291.949012.221721.69468
INF2Developing inflorescences (1-1.5 cm)2.265112.326972.005362.4361
ROORoots from the seedlings (10 cm shoot stage)23.458626.537525.141529.9673
NODDeveloping tillers at six leaf stage, 3rd internode36.261747.548539.2112138.145
CAR5Developing grain, bracts removed (5 DPA)63.315855.882559.949957.5397
CAR15Developing grain, bracts removed (15 DPA)2.510573.456892.922267.02133



CDS Structure of MLOC_60721






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60721.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363113NoneNoneNoneNone
MLOC_60721.1CUST_4341_PI427708080AvailableAvailablecontig_44703 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g44840.1 -1 0.0 1268 619/733 (84%) 13104.m04484 protein glycosyl hydrolase family 3 protein, putative, expressed
TAIR PP10 AT5G10560.1 -1 0.0 902 442/752 (59%) Glycosyl hydrolase family protein | chr5:3336335-3339351 REVERSE LENGTH=792