MLOC_60720 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9442920.7088370.5409150.707806
LEAShoots from the seedlings (10 cm shoot stage)5.534337.0942615.70597.47411
INF1Young developing inflorescences (5mm)0.1127670.0262290.02806340.0497846
INF2Developing inflorescences (1-1.5 cm)0.09562560.022822100.078045
ROORoots from the seedlings (10 cm shoot stage)2.271732.512584.335722.92871
NODDeveloping tillers at six leaf stage, 3rd internode0.03831470.05520080.1362470.196782
CAR5Developing grain, bracts removed (5 DPA)0.1731720.1376850.1105010.142377
CAR15Developing grain, bracts removed (15 DPA)6.542275.398494.6707614.3441



CDS Structure of MLOC_60720






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60720.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360012NoneNoneNoneNone
MLOC_60720.1CUST_4340_PI427708080AvailableAvailablecontig_44702 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g12890.1 +3 5e-147 434 264/365 (72%) 13107.m01339 protein metal cation transporter, putative, expressed
TAIR PP10 AT1G05300.1 +3 6e-84 269 172/353 (49%) | Symbols: ZIP5 | zinc transporter 5 precursor | chr1:1545258-1547709 REVERSE LENGTH=360