MLOC_60716 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.210453.360593.006763.33525
LEAShoots from the seedlings (10 cm shoot stage)4.32698.494274.741674.26323
INF1Young developing inflorescences (5mm)0.5765410.1555530.4084010.324402
INF2Developing inflorescences (1-1.5 cm)0.1374940.1570610.1903280.177754
ROORoots from the seedlings (10 cm shoot stage)5.161052.692922.797572.97038
NODDeveloping tillers at six leaf stage, 3rd internode5.286314.861137.7821312.048
CAR5Developing grain, bracts removed (5 DPA)0.4636340.3350320.3255630.367439
CAR15Developing grain, bracts removed (15 DPA)0.1150680.1375370.1093780.323321



CDS Structure of MLOC_60716






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60716.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371719NoneNoneNoneNone
MLOC_60716.2CUST_4338_PI427708080AvailableAvailablecontig_44695 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g33390.1 +2 0.0 621 335/426 (79%) 13104.m03216 protein prephenate dehydratase domain containing protein, expressed
TAIR PP10 AT1G08250.1 +2 1e-175 508 281/408 (69%) | Symbols: ADT6 | arogenate dehydratase 6 | chr1:2588994-2590235 REVERSE LENGTH=413