- Predicted Gene MLOC_60716
MLOC_60716 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.21045 | 3.36059 | 3.00676 | 3.33525 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.3269 | 8.49427 | 4.74167 | 4.26323 |
INF1 | Young developing inflorescences (5mm) | 0.576541 | 0.155553 | 0.408401 | 0.324402 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.137494 | 0.157061 | 0.190328 | 0.177754 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.16105 | 2.69292 | 2.79757 | 2.97038 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.28631 | 4.86113 | 7.78213 | 12.048 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.463634 | 0.335032 | 0.325563 | 0.367439 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.115068 | 0.137537 | 0.109378 | 0.323321 |
CDS Structure of MLOC_60716
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60716.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g33390.1 |
+2 |
0.0 |
621 |
335/426 (79%) |
13104.m03216 protein prephenate dehydratase domain containing protein, expressed |
TAIR PP10 |
AT1G08250.1 |
+2 |
1e-175 |
508 |
281/408 (69%) |
| Symbols: ADT6 | arogenate dehydratase 6 | chr1:2588994-2590235 REVERSE LENGTH=413 |