MLOC_60707 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.544811.730512.779314.0256
LEAShoots from the seedlings (10 cm shoot stage)15.219811.215819.050612.3761
INF1Young developing inflorescences (5mm)15.877417.297615.419113.8147
INF2Developing inflorescences (1-1.5 cm)14.351216.051115.479916.5284
ROORoots from the seedlings (10 cm shoot stage)15.251511.49638.4534513.2573
NODDeveloping tillers at six leaf stage, 3rd internode23.591435.358543.386104.598
CAR5Developing grain, bracts removed (5 DPA)18.74916.679817.172616.8199
CAR15Developing grain, bracts removed (15 DPA)5.153214.819435.2292211.6809



CDS Structure of MLOC_60707






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60707.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373637NoneNoneNoneNone
MLOC_60707.1CUST_4335_PI427708080AvailableAvailablecontig_44691 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g03060.3 +2 0.0 551 271/290 (93%) 13102.m00279 protein cyclin-dependent kinase A-2, putative, expressed
TAIR PP10 AT3G48750.1 +2 8e-180 509 247/288 (86%) | Symbols: CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1 | cell division control 2 | chr3:18072238-18074296 FORWARD LENGTH=294