MLOC_60705 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.241011.073071.891851.25195
LEAShoots from the seedlings (10 cm shoot stage)0.21319400.201580.10766
INF1Young developing inflorescences (5mm)0.7946030.9031410.6839820.672244
INF2Developing inflorescences (1-1.5 cm)0.8936790.8957151.006670.95719
ROORoots from the seedlings (10 cm shoot stage)2.086491.506671.714181.70647
NODDeveloping tillers at six leaf stage, 3rd internode0.1506680.187130.07844580.45554
CAR5Developing grain, bracts removed (5 DPA)1.567321.495451.453441.34123
CAR15Developing grain, bracts removed (15 DPA)0.2355280.2035240.1371720.470497



CDS Structure of MLOC_60705






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60705.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359029NoneNoneNoneNone
MLOC_60705.1CUST_4334_PI427708080AvailableAvailablecontig_44688 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g42210.1 -3 2e-18 88 105/165 (64%) 13101.m04334 protein LTPL47 - Protease inhibitor/seed storage/LTP family protein precursor, putative
TAIR PP10None-----