MLOC_60702 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3217770.2848430.2509950.303618
LEAShoots from the seedlings (10 cm shoot stage)0.7723151.488571.428511.09012
INF1Young developing inflorescences (5mm)0.04539510.12748700.0568973
INF2Developing inflorescences (1-1.5 cm)3.032443.372774.440744.32752
ROORoots from the seedlings (10 cm shoot stage)1.612491.411021.129551.72258
NODDeveloping tillers at six leaf stage, 3rd internode0.03087740.2119250.03120640.522096
CAR5Developing grain, bracts removed (5 DPA)5.063689.850727.634188.7409
CAR15Developing grain, bracts removed (15 DPA)4.61624.419243.5974111.2998



CDS Structure of MLOC_60702






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60702.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376885NoneNoneNoneNone
MLOC_60702.4CUST_4333_PI427708080AvailableAvailablecontig_44688 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g42190.1 +3 3e-68 216 112/138 (81%) 13101.m04332 protein heat shock protein DnaJ, putative, expressed
TAIR PP10 AT1G56300.1 +3 3e-32 120 61/126 (48%) Chaperone DnaJ-domain superfamily protein | chr1:21079022-21080168 REVERSE LENGTH=156