MLOC_60662 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.533438.104439.987439.8394
LEAShoots from the seedlings (10 cm shoot stage)28.631723.209724.253222.5454
INF1Young developing inflorescences (5mm)15.659916.533917.136514.6072
INF2Developing inflorescences (1-1.5 cm)15.537515.657317.683718.4909
ROORoots from the seedlings (10 cm shoot stage)44.583754.533938.914567.0672
NODDeveloping tillers at six leaf stage, 3rd internode17.731920.00419.868462.4021
CAR5Developing grain, bracts removed (5 DPA)25.607524.576323.519725.4547
CAR15Developing grain, bracts removed (15 DPA)8.100679.026668.7727220.9471



CDS Structure of MLOC_60662






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60662.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370273NoneNoneNoneNone
MLOC_60662.1CUST_4326_PI427708080AvailableAvailablecontig_44641 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g52730.1 -1 0.0 701 344/385 (89%) 13104.m05417 protein NAD dependent epimerase/dehydratase family domain containing protein, expressed
TAIR PP10 AT1G30620.2 -1 0.0 669 326/400 (82%) | Symbols: HSR8, MUR4, UXE1 | NAD(P)-binding Rossmann-fold superfamily protein | chr1:10855496-10857970 FORWARD LENGTH=419