MLOC_6065 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 736.877 | 613.351 | 621.527 | 666.819 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 379.633 | 143.491 | 179.903 | 202.317 |
| INF1 | Young developing inflorescences (5mm) | 310.918 | 267.084 | 243.581 | 241.399 |
| INF2 | Developing inflorescences (1-1.5 cm) | 161.504 | 190.444 | 191.083 | 197.274 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 531.65 | 573.809 | 460.548 | 658.165 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 433.456 | 326.014 | 205.137 | 973.906 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 725.931 | 682.167 | 706.669 | 683.06 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 187.074 | 171.875 | 160.703 | 409.433 |
CDS Structure of MLOC_6065
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6065.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g40270.1 |
-3 |
0.0 |
724 |
337/354 (95%) |
13103.m04360 protein alpha-1,4-glucan-protein synthase, putative, expressed |
| TAIR PP10 |
AT5G15650.1 |
-3 |
0.0 |
663 |
312/354 (88%) |
| Symbols: RGP2, ATRGP2 | reversibly glycosylated polypeptide 2 | chr5:5092203-5094093 FORWARD LENGTH=360 |
