- Predicted Gene MLOC_60643
MLOC_60643 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 23.2769 | 20.7673 | 19.6627 | 19.4513 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.98258 | 4.60597 | 5.19897 | 5.053 |
| INF1 | Young developing inflorescences (5mm) | 11.3955 | 12.382 | 11.4756 | 9.35648 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.89792 | 10.9742 | 9.62396 | 10.4073 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.396 | 12.8463 | 11.7656 | 14.534 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.21393 | 4.43622 | 3.54003 | 12.7549 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.9612 | 10.6464 | 8.85138 | 9.0835 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.85305 | 1.18668 | 1.51193 | 3.32991 |
CDS Structure of MLOC_60643
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60643.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g39220.1 |
-3 |
0.0 |
585 |
297/335 (89%) |
13109.m03927 protein delta14-sterol reductase, putative, expressed |
| TAIR PP10 |
AT3G52940.1 |
-3 |
4e-168 |
487 |
241/335 (72%) |
| Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis ERG4/ERG24 family | chr3:19630369-19633112 REVERSE LENGTH=369 |