MLOC_60642 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.09043260.1199810.1788910.115382
LEAShoots from the seedlings (10 cm shoot stage)0.1413310.1493530.1845010.124889
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.031016300.0424775
ROORoots from the seedlings (10 cm shoot stage)00.17258800.459328
NODDeveloping tillers at six leaf stage, 3rd internode0.03489450.1426590.1578150.43336
CAR5Developing grain, bracts removed (5 DPA)0.1175640.1069930.0863180.0929103
CAR15Developing grain, bracts removed (15 DPA)0.1195720.1706520.1159520.29358



CDS Structure of MLOC_60642






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60642.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373966NoneNoneNoneNone
MLOC_60642.2CUST_4320_PI427708080AvailableAvailablecontig_44619 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g50170.2 +2 0.0 595 311/418 (74%) 13105.m05379 protein ATPCME, putative, expressed
TAIR PP10 AT3G02410.1 +2 2e-166 481 244/383 (64%) | Symbols: ICME-LIKE2 | alpha/beta-Hydrolases superfamily protein | chr3:492118-494877 REVERSE LENGTH=422