- Predicted Gene MLOC_60617
MLOC_60617 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.05387 | 12.3105 | 11.513 | 11.4682 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 30.3583 | 38.0757 | 36.3479 | 29.8751 |
| INF1 | Young developing inflorescences (5mm) | 6.06569 | 4.16912 | 3.85729 | 4.33678 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.63249 | 5.63538 | 4.29638 | 5.51348 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.15787 | 3.6123 | 3.43491 | 4.1315 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.310776 | 0.265275 | 0.236556 | 0.750231 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 21.6205 | 21.7414 | 20.5008 | 22.4295 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.860841 | 1.05655 | 1.01436 | 2.54046 |
CDS Structure of MLOC_60617
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60617.9
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g51620.1 |
-1 |
0.0 |
1170 |
787/1135 (69%) |
13105.m05571 protein expressed protein |
| TAIR PP10 |
AT3G48200.1 |
-1 |
0.0 |
711 |
493/1106 (45%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr3:17832949-17837371 REVERSE LENGTH=1088 |