MLOC_606 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.960338.281328.215131.2419
LEAShoots from the seedlings (10 cm shoot stage)16.75127.600745.140628.4876
INF1Young developing inflorescences (5mm)82.53781.242776.445868.6349
INF2Developing inflorescences (1-1.5 cm)65.736270.739960.875176.0999
ROORoots from the seedlings (10 cm shoot stage)6.3687120.310818.162822.2231
NODDeveloping tillers at six leaf stage, 3rd internode0.3391980.5775681.332522.39437
CAR5Developing grain, bracts removed (5 DPA)32.541231.512932.935533.0109
CAR15Developing grain, bracts removed (15 DPA)7.294096.260626.1169715.9897



CDS Structure of MLOC_606






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364799
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364799CUST_20974_PI427708080NoneNoneNone
MLOC_60020.2NoneAvailableNonecontig_44124 (Mapped)
MLOC_606.1NoneAvailableAvailablecontig_104455 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----