- Predicted Gene MLOC_60552
MLOC_60552 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.9456 | 2.36076 | 2.48267 | 2.51111 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.88769 | 2.23545 | 2.73259 | 2.80064 |
| INF1 | Young developing inflorescences (5mm) | 3.74839 | 4.34354 | 5.32494 | 4.07441 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.68389 | 7.34149 | 6.92774 | 8.30534 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.43281 | 1.82447 | 1.41586 | 2.42417 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.09453 | 6.98215 | 4.58707 | 24.4406 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.88272 | 5.33588 | 5.01408 | 5.448 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.827428 | 0.777089 | 0.557755 | 1.89682 |
CDS Structure of MLOC_60552
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60552.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g39260.1 |
-3 |
0.0 |
611 |
376/701 (54%) |
13101.m04007 protein OsFtsH5 FtsH protease, homologue of AtFtsH4, expressed |
| TAIR PP10 |
AT2G26140.1 |
-3 |
0.0 |
596 |
372/659 (56%) |
| Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-11135126 REVERSE LENGTH=717 |