- Predicted Gene MLOC_60545
MLOC_60545 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60545_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60545_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.78189 | 4.01686 | 3.36412 | 3.35343 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.62697 | 2.67473 | 3.99606 | 2.87531 |
INF1 | Young developing inflorescences (5mm) | 8.45615 | 9.40319 | 8.37051 | 7.14226 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.6484 | 12.4864 | 11.0416 | 12.5991 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.3527 | 4.54629 | 3.76484 | 4.88535 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.38849 | 2.2605 | 1.93654 | 6.6537 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.36563 | 9.04349 | 9.59325 | 8.07545 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.81827 | 5.95872 | 4.787 | 12.188 |
CDS Structure of MLOC_60545
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60545.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g50980.1 |
-2 |
0.0 |
982 |
513/831 (62%) |
13103.m05541 protein ATSIZ1/SIZ1, putative, expressed |
TAIR PP10 |
AT5G60410.3 |
-2 |
0.0 |
631 |
339/698 (49%) |
| Symbols: ATSIZ1, SIZ1 | DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain | chr5:24295226-24300300 FORWARD LENGTH=832 |