MLOC_60544 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.101379000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_60544






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60544.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375795NoneNoneNoneNone
MLOC_60544.1CUST_4305_PI427708080AvailableAvailablecontig_44506 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g49470.1 +3 5e-114 345 197/317 (62%) 13107.m05324 protein protein kinase APK1B, chloroplast precursor, putative, expressed
TAIR PP10 AT3G24790.1 +3 1e-111 338 199/328 (61%) Protein kinase superfamily protein | chr3:9052996-9054531 FORWARD LENGTH=363