- Predicted Gene MLOC_60540
MLOC_60540 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60540_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60540_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 33.4224 | 32.8071 | 36.3786 | 34.6625 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 43.6612 | 48.3376 | 35.2589 | 35.6155 |
INF1 | Young developing inflorescences (5mm) | 13.3115 | 11.2087 | 12.7938 | 10.9808 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.8128 | 13.4948 | 11.5492 | 14.1077 |
ROO | Roots from the seedlings (10 cm shoot stage) | 80.0933 | 78.6131 | 60.844 | 92.6835 |
NOD | Developing tillers at six leaf stage, 3rd internode | 166.911 | 203.704 | 185.576 | 642.855 |
CAR5 | Developing grain, bracts removed (5 DPA) | 23.7192 | 23.8068 | 25.2902 | 24.6954 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.55112 | 6.59808 | 6.90851 | 16.3841 |
CDS Structure of MLOC_60540
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60540.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g43420.1 |
+2 |
2e-161 |
465 |
233/285 (82%) |
13101.m04486 protein expressed protein |
TAIR PP10 |
AT2G46225.1 |
+2 |
5e-83 |
263 |
144/283 (51%) |
| Symbols: ABIL1 | ABI-1-like 1 | chr2:18982113-18984074 FORWARD LENGTH=298 |