MLOC_60529 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.8462715.463613.295212.8795
LEAShoots from the seedlings (10 cm shoot stage)11.0889.9245810.04568.72695
INF1Young developing inflorescences (5mm)30.247230.567928.724624.1885
INF2Developing inflorescences (1-1.5 cm)35.422236.963230.762136.7915
ROORoots from the seedlings (10 cm shoot stage)11.400115.62811.757817.0049
NODDeveloping tillers at six leaf stage, 3rd internode5.815148.679099.1795227.9636
CAR5Developing grain, bracts removed (5 DPA)25.282823.292925.355722.7376
CAR15Developing grain, bracts removed (15 DPA)13.550811.866111.685726.8947



CDS Structure of MLOC_60529






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60529.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374711NoneNoneNoneNone
MLOC_60529.1CUST_4302_PI427708080AvailableAvailablecontig_44492 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g49230.2 +3 0.0 1825 902/1009 (89%) 13107.m05287 protein ubiquitin-activating enzyme, putative, expressed
TAIR PP10 AT2G30110.1 +3 0.0 1559 751/1010 (74%) | Symbols: ATUBA1, MOS5, UBA1 | ubiquitin-activating enzyme 1 | chr2:12852632-12857369 REVERSE LENGTH=1080