- Predicted Gene MLOC_60510
MLOC_60510 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.20802 | 1.41771 | 1.214 | 1.00063 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 24.9704 | 34.8619 | 39.6825 | 21.353 |
| INF1 | Young developing inflorescences (5mm) | 5.85456 | 7.49482 | 7.56064 | 4.29906 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.23655 | 5.06597 | 4.76495 | 4.01308 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.683374 | 1.66932 | 2.0691 | 1.28443 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.2216 | 13.5038 | 14.061 | 35.2094 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.54593 | 2.00966 | 1.67272 | 1.2809 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.465907 | 0.789414 | 0.616706 | 0.987137 |
CDS Structure of MLOC_60510
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60510.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g17830.1 |
+2 |
3e-31 |
106 |
59/130 (45%) |
13105.m01882 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT1G66330.2 |
-1 |
4e-23 |
102 |
61/94 (65%) |
senescence-associated family protein | chr1:24729880-24732144 REVERSE LENGTH=417 |