MLOC_60508 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)1.337721.805962.46971.48992
INF1Young developing inflorescences (5mm)0.6160310.6215740.3135410.418341
INF2Developing inflorescences (1-1.5 cm)0.5166720.7607330.1427060.545421
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.1148670.4672090.1556731.21767
CAR5Developing grain, bracts removed (5 DPA)0.3771130.22715900.289134
CAR15Developing grain, bracts removed (15 DPA)000.2110540.201971



CDS Structure of MLOC_60508






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60508.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60508.1CUST_8290_PI427708083AvailableAvailablecontig_44476 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g17830.1 +1 4e-22 96 54/161 (34%) 13105.m01882 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----