- Predicted Gene MLOC_60499
MLOC_60499 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60499_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60499_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 9.11486 | 9.06249 | 8.12527 | 11.7886 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.26656 | 1.09774 | 0.341925 | 1.98773 |
INF1 | Young developing inflorescences (5mm) | 41.4238 | 41.0672 | 37.61 | 41.5128 |
INF2 | Developing inflorescences (1-1.5 cm) | 34.8251 | 45.3163 | 34.2814 | 56.6362 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.26152 | 7.15094 | 8.18674 | 11.8667 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.424826 | 0.488202 | 0.551581 | 2.17189 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.95458 | 4.40718 | 3.9545 | 5.45687 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.19979 | 0.884422 | 1.0504 | 3.00733 |
CDS Structure of MLOC_60499
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60499.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g22040.1 |
-2 |
2e-143 |
439 |
285/411 (69%) |
13103.m02647 protein expressed protein |
TAIR PP10 |
AT2G38370.1 |
-2 |
3e-44 |
168 |
173/536 (32%) |
Plant protein of unknown function (DUF827) | chr2:16072184-16074168 REVERSE LENGTH=522 |