MLOC_60499 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.114869.062498.1252711.7886
LEAShoots from the seedlings (10 cm shoot stage)5.266561.097740.3419251.98773
INF1Young developing inflorescences (5mm)41.423841.067237.6141.5128
INF2Developing inflorescences (1-1.5 cm)34.825145.316334.281456.6362
ROORoots from the seedlings (10 cm shoot stage)3.261527.150948.1867411.8667
NODDeveloping tillers at six leaf stage, 3rd internode0.4248260.4882020.5515812.17189
CAR5Developing grain, bracts removed (5 DPA)3.954584.407183.95455.45687
CAR15Developing grain, bracts removed (15 DPA)1.199790.8844221.05043.00733



CDS Structure of MLOC_60499






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60499.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376184NoneNoneNoneNone
MLOC_60499.2CUST_18211_PI427708080AvailableAvailablecontig_44460 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g22040.1 -2 2e-143 439 285/411 (69%) 13103.m02647 protein expressed protein
TAIR PP10 AT2G38370.1 -2 3e-44 168 173/536 (32%) Plant protein of unknown function (DUF827) | chr2:16072184-16074168 REVERSE LENGTH=522