MLOC_60497 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.265683.706622.758344.22252
LEAShoots from the seedlings (10 cm shoot stage)1.754140.676340.4400230.874757
INF1Young developing inflorescences (5mm)30.912233.492134.952333.8109
INF2Developing inflorescences (1-1.5 cm)32.878341.802935.734950.544
ROORoots from the seedlings (10 cm shoot stage)3.001374.757643.993346.94061
NODDeveloping tillers at six leaf stage, 3rd internode0.09428870.1687810.1066170.563541
CAR5Developing grain, bracts removed (5 DPA)5.780116.284636.031327.48373
CAR15Developing grain, bracts removed (15 DPA)0.6745810.6288720.9746952.07329



CDS Structure of MLOC_60497






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60497.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60497.1CUST_14140_PI427708080AvailableAvailablecontig_44461 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g37040.1 -3 0.0 780 444/549 (81%) 13109.m03667 protein DUF630/DUF632 domains containing protein, putative, expressed
TAIR PP10 AT1G21740.1 -3 2e-66 236 149/456 (33%) Protein of unknown function (DUF630 and DUF632) | chr1:7641580-7645078 FORWARD LENGTH=953