MLOC_60496 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3261370.6590610.6146110.527946
LEAShoots from the seedlings (10 cm shoot stage)0.4166280.2154260.07171180.189301
INF1Young developing inflorescences (5mm)1.659731.752561.932331.49874
INF2Developing inflorescences (1-1.5 cm)0.4425950.517220.8379710.630294
ROORoots from the seedlings (10 cm shoot stage)1.152450.557061.113490.726134
NODDeveloping tillers at six leaf stage, 3rd internode0.07743960.0580830.1060270.171724
CAR5Developing grain, bracts removed (5 DPA)2.59162.945613.645363.02212
CAR15Developing grain, bracts removed (15 DPA)0.5680490.3338760.3723181.073



CDS Structure of MLOC_60496






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60496.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369480NoneNoneNoneNone
MLOC_60496.2CUST_4297_PI427708080AvailableAvailablecontig_44461 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g15550.1 +1 7e-22 99 83/216 (38%) 13109.m01473 protein OsFBX313 - F-box domain containing protein, expressed
TAIR PP10None-----