- Predicted Gene MLOC_60493
MLOC_60493 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 31.3305 | 23.7378 | 26.1251 | 24.0309 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.9018 | 7.75905 | 10.0535 | 8.25321 |
INF1 | Young developing inflorescences (5mm) | 29.3515 | 24.3754 | 22.6939 | 20.0311 |
INF2 | Developing inflorescences (1-1.5 cm) | 19.1233 | 21.98 | 21.9029 | 20.3525 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.7868 | 17.7248 | 20.2693 | 18.4498 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.29138 | 5.77092 | 5.90376 | 15.8718 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.3434 | 28.5097 | 27.3179 | 23.8248 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.65026 | 5.96381 | 5.21139 | 11.9034 |
CDS Structure of MLOC_60493
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60493.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g32550.1 |
+2 |
1e-66 |
210 |
106/114 (93%) |
13104.m03118 protein defender against cell death 1, putative, expressed |
TAIR PP10 |
AT1G32210.1 |
+2 |
3e-58 |
187 |
94/108 (87%) |
| Symbols: ATDAD1 | Defender against death (DAD family) protein | chr1:11606047-11607652 REVERSE LENGTH=115 |