- Predicted Gene MLOC_60492
MLOC_60492 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60492_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60492_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 50.0199 | 39.8394 | 42.5237 | 48.2522 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.3067 | 1.65336 | 2.00086 | 5.66286 |
INF1 | Young developing inflorescences (5mm) | 28.554 | 34.5714 | 25.1467 | 30.5042 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.5027 | 29.7989 | 21.9011 | 32.5228 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.5238 | 16.3974 | 13.8273 | 21.1373 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.08689 | 2.13214 | 1.18903 | 4.9624 |
CAR5 | Developing grain, bracts removed (5 DPA) | 19.0738 | 25.7918 | 21.098 | 27.6873 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.925163 | 0.288808 | 0.636458 | 1.64609 |
CDS Structure of MLOC_60492
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60492.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g45990.2 |
+1 |
0.0 |
522 |
281/355 (79%) |
13106.m04856 protein patellin-5, putative, expressed |
TAIR PP10 |
AT1G30690.2 |
+1 |
8e-113 |
346 |
185/347 (53%) |
Sec14p-like phosphatidylinositol transfer family protein | chr1:10888284-10890085 FORWARD LENGTH=540 |