- Predicted Gene MLOC_60490
MLOC_60490 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60490_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60490_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.5809 | 10.077 | 9.03204 | 8.72375 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.483 | 13.1834 | 12.971 | 12.3598 |
INF1 | Young developing inflorescences (5mm) | 29.5907 | 30.6951 | 30.0003 | 24.6376 |
INF2 | Developing inflorescences (1-1.5 cm) | 27.6877 | 31.1324 | 27.3657 | 30.417 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.00901 | 6.33512 | 6.00102 | 7.27897 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.760074 | 1.21185 | 1.81437 | 4.26636 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.3899 | 12.0493 | 13.5625 | 11.6466 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.62604 | 2.93245 | 2.15917 | 5.72553 |
CDS Structure of MLOC_60490
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60490.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g45980.1 |
+3 |
0.0 |
1066 |
505/604 (84%) |
13106.m04854 protein toprim domain-containing protein, putative, expressed |
TAIR PP10 |
AT1G30680.1 |
+3 |
0.0 |
805 |
386/597 (65%) |
toprim domain-containing protein | chr1:10881665-10886060 FORWARD LENGTH=709 |