MLOC_60490 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.580910.0779.032048.72375
LEAShoots from the seedlings (10 cm shoot stage)15.48313.183412.97112.3598
INF1Young developing inflorescences (5mm)29.590730.695130.000324.6376
INF2Developing inflorescences (1-1.5 cm)27.687731.132427.365730.417
ROORoots from the seedlings (10 cm shoot stage)3.009016.335126.001027.27897
NODDeveloping tillers at six leaf stage, 3rd internode0.7600741.211851.814374.26636
CAR5Developing grain, bracts removed (5 DPA)12.389912.049313.562511.6466
CAR15Developing grain, bracts removed (15 DPA)2.626042.932452.159175.72553



CDS Structure of MLOC_60490






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60490.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60490.6CUST_14139_PI427708080AvailableAvailablecontig_44460 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45980.1 +3 0.0 1066 505/604 (84%) 13106.m04854 protein toprim domain-containing protein, putative, expressed
TAIR PP10 AT1G30680.1 +3 0.0 805 386/597 (65%) toprim domain-containing protein | chr1:10881665-10886060 FORWARD LENGTH=709