- Predicted Gene MLOC_60488
MLOC_60488 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60488_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60488_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.01304 | 5.03749 | 5.34201 | 2.74423 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.56693 | 6.94643 | 5.87422 | 4.09038 |
INF1 | Young developing inflorescences (5mm) | 7.28191 | 5.35753 | 5.99723 | 3.5542 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.59609 | 2.14022 | 4.49559 | 2.16816 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.33258 | 10.2228 | 10.4531 | 6.47491 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.15728 | 3.47435 | 4.79193 | 8.53508 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.89457 | 2.20449 | 2.046 | 1.60366 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.1231 | 2.59666 | 2.5086 | 3.8956 |
CDS Structure of MLOC_60488
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60488.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g03570.1 |
-2 |
0.0 |
587 |
321/602 (53%) |
13110.m00269 protein RGH1A, putative, expressed |
TAIR PP10 |
AT3G46730.1 |
-2 |
5e-54 |
206 |
159/530 (30%) |
NB-ARC domain-containing disease resistance protein | chr3:17213069-17215612 REVERSE LENGTH=847 |