MLOC_60457 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.626148.728428.489458.34247
LEAShoots from the seedlings (10 cm shoot stage)9.216318.703558.968367.76308
INF1Young developing inflorescences (5mm)16.160716.915815.779312.9146
INF2Developing inflorescences (1-1.5 cm)13.141113.38613.495813.9987
ROORoots from the seedlings (10 cm shoot stage)3.4378610.04636.249910.4506
NODDeveloping tillers at six leaf stage, 3rd internode3.468875.9097610.574523.9503
CAR5Developing grain, bracts removed (5 DPA)9.816289.5027510.36089.06402
CAR15Developing grain, bracts removed (15 DPA)12.475511.603711.236925.3237



CDS Structure of MLOC_60457






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60457.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60457.1CUST_8283_PI427708083AvailableAvailablecontig_44419 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g58910.2 +3 2e-168 537 284/489 (58%) 13103.m06469 protein expressed protein
TAIR PP10 AT4G13750.1 +3 9e-75 265 167/468 (36%) | Symbols: NOV | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein | chr4:7975191-7987558 FORWARD LENGTH=2729