MLOC_60449 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains63.764148.788546.999154.0331
LEAShoots from the seedlings (10 cm shoot stage)42.161224.9429.108427.3971
INF1Young developing inflorescences (5mm)24.073124.465224.172522.0801
INF2Developing inflorescences (1-1.5 cm)25.932927.465725.218930.7139
ROORoots from the seedlings (10 cm shoot stage)68.735561.538248.285475.4154
NODDeveloping tillers at six leaf stage, 3rd internode23.536838.170329.9011117.33
CAR5Developing grain, bracts removed (5 DPA)51.79353.107851.765955.1533
CAR15Developing grain, bracts removed (15 DPA)21.730921.463419.760952.4995



CDS Structure of MLOC_60449






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60449.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248734.1NoneNoneNoneNone
MLOC_60449.2CUST_4289_PI427708080AvailableAvailablecontig_44406 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g32240.1 +1 0.0 841 407/451 (90%) 13111.m03136 protein cytochrome P450 51, putative, expressed
TAIR PP10 AT1G11680.1 +1 0.0 753 359/448 (80%) | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYTOCHROME P450 51G1 | chr1:3938925-3940585 FORWARD LENGTH=488