MLOC_60439 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.7485413.237512.398111.9338
LEAShoots from the seedlings (10 cm shoot stage)14.272111.835311.014811.5769
INF1Young developing inflorescences (5mm)32.560232.234634.427528.0137
INF2Developing inflorescences (1-1.5 cm)42.628443.066638.893947.1097
ROORoots from the seedlings (10 cm shoot stage)3.566366.756575.715418.52941
NODDeveloping tillers at six leaf stage, 3rd internode7.972719.4599610.889735.1009
CAR5Developing grain, bracts removed (5 DPA)15.520814.69815.812915.4072
CAR15Developing grain, bracts removed (15 DPA)9.708968.136178.0534820.1052



CDS Structure of MLOC_60439






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60439.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359457NoneNoneNoneNone
MLOC_60439.1CUST_4286_PI427708080AvailableAvailablecontig_44387 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g08820.1 +1 0.0 1388 806/1166 (69%) 13103.m01021 protein expressed protein
TAIR PP10 AT3G21290.1 +1 3e-65 243 163/351 (46%) dentin sialophosphoprotein-related | chr3:7482318-7488676 FORWARD LENGTH=1192