MLOC_60426 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.7401816.1914.117111.5004
LEAShoots from the seedlings (10 cm shoot stage)17.046415.351614.643612.7576
INF1Young developing inflorescences (5mm)29.317128.229626.064521.1162
INF2Developing inflorescences (1-1.5 cm)38.931737.041434.323336.9077
ROORoots from the seedlings (10 cm shoot stage)8.8068717.427112.764117.2564
NODDeveloping tillers at six leaf stage, 3rd internode7.836611.40939.688935.4469
CAR5Developing grain, bracts removed (5 DPA)21.13917.885421.179717.3205
CAR15Developing grain, bracts removed (15 DPA)15.904714.387115.064330.1813



CDS Structure of MLOC_60426






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60426.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60426.3CUST_14132_PI427708080AvailableAvailablecontig_44376 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g45400.1 -3 0.0 2689 1554/2109 (74%) 13107.m04784 protein expressed protein
TAIR PP10 AT4G00450.1 -3 0.0 1229 822/1936 (42%) | Symbols: CRP, CCT | RNA polymerase II transcription mediators | chr4:202425-210666 FORWARD LENGTH=2253