MLOC_60425 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.771673.791153.112163.34145
LEAShoots from the seedlings (10 cm shoot stage)13.707914.462117.191411.2055
INF1Young developing inflorescences (5mm)9.0321211.634611.8918.97323
INF2Developing inflorescences (1-1.5 cm)7.434467.501367.145197.82088
ROORoots from the seedlings (10 cm shoot stage)1.466281.624892.097171.66314
NODDeveloping tillers at six leaf stage, 3rd internode7.5743311.657315.191534.5798
CAR5Developing grain, bracts removed (5 DPA)5.95896.893945.523945.71392
CAR15Developing grain, bracts removed (15 DPA)0.4997060.5755180.6226271.30689



CDS Structure of MLOC_60425






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60425.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356931NoneNoneNoneNone
MLOC_60425.1CUST_4285_PI427708080AvailableAvailablecontig_44376 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g01570.2 -2 2e-166 486 282/363 (78%) 13103.m00078 protein expressed protein
TAIR PP10 AT3G61320.1 -2 5e-115 354 208/343 (61%) Bestrophin-like protein | chr3:22694002-22695474 FORWARD LENGTH=410