MLOC_6041 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.01762740.02092230.08913260.0514311
INF2Developing inflorescences (1-1.5 cm)0.138312000.173774
ROORoots from the seedlings (10 cm shoot stage)0.1066470.028874700.0690758
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)7.89676.661147.503988.45265
CAR15Developing grain, bracts removed (15 DPA)2.781662.552522.275837.16389



CDS Structure of MLOC_6041






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6041.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6041.1CUST_14128_PI427708080AvailableAvailablecontig_136998 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g38210.1 -1 4e-156 462 281/475 (59%) 13103.m04150 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT2G32460.2 -1 2e-61 213 94/119 (79%) | Symbols: MYB101, ATMYB101, ATM1 | myb domain protein 101 | chr2:13782419-13784359 REVERSE LENGTH=478