MLOC_60385 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.5426.315535.342274.86966
LEAShoots from the seedlings (10 cm shoot stage)11.469813.159413.23959.86155
INF1Young developing inflorescences (5mm)6.916257.821568.969575.9307
INF2Developing inflorescences (1-1.5 cm)9.488067.7501310.35448.88674
ROORoots from the seedlings (10 cm shoot stage)9.8391911.674410.383412.0947
NODDeveloping tillers at six leaf stage, 3rd internode7.689559.6940812.078830.2138
CAR5Developing grain, bracts removed (5 DPA)7.544166.540817.145416.12495
CAR15Developing grain, bracts removed (15 DPA)3.668883.562264.010957.48844



CDS Structure of MLOC_60385






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60385.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60385.1CUST_14125_PI427708080AvailableAvailablecontig_44333 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g08180.1 -2 0.0 1176 688/975 (71%) 13112.m00862 protein receptor-like protein kinase 2 precursor, putative, expressed
TAIR PP10 AT1G34420.1 -2 0.0 744 450/952 (47%) leucine-rich repeat transmembrane protein kinase family protein | chr1:12584587-12587570 FORWARD LENGTH=966