- Predicted Gene MLOC_60385
MLOC_60385 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.542 | 6.31553 | 5.34227 | 4.86966 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.4698 | 13.1594 | 13.2395 | 9.86155 |
INF1 | Young developing inflorescences (5mm) | 6.91625 | 7.82156 | 8.96957 | 5.9307 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.48806 | 7.75013 | 10.3544 | 8.88674 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.83919 | 11.6744 | 10.3834 | 12.0947 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.68955 | 9.69408 | 12.0788 | 30.2138 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.54416 | 6.54081 | 7.14541 | 6.12495 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.66888 | 3.56226 | 4.01095 | 7.48844 |
CDS Structure of MLOC_60385
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60385.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g08180.1 |
-2 |
0.0 |
1176 |
688/975 (71%) |
13112.m00862 protein receptor-like protein kinase 2 precursor, putative, expressed |
TAIR PP10 |
AT1G34420.1 |
-2 |
0.0 |
744 |
450/952 (47%) |
leucine-rich repeat transmembrane protein kinase family protein | chr1:12584587-12587570 FORWARD LENGTH=966 |