MLOC_60376 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.415484.315094.028423.47667
LEAShoots from the seedlings (10 cm shoot stage)33.984695.184173.90842.2143
INF1Young developing inflorescences (5mm)9.762825.580485.959495.22355
INF2Developing inflorescences (1-1.5 cm)5.559664.26586.736784.88254
ROORoots from the seedlings (10 cm shoot stage)49.418439.637640.061536.672
NODDeveloping tillers at six leaf stage, 3rd internode30.58318.216538.008552.1344
CAR5Developing grain, bracts removed (5 DPA)1.482861.685151.421921.21302
CAR15Developing grain, bracts removed (15 DPA)1.216971.31061.156182.47107



CDS Structure of MLOC_60376






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60376.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359719NoneNoneNoneNone
MLOC_60376.3CUST_18208_PI427708080AvailableAvailablecontig_44270 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g20930.1 -3 1e-43 159 98/176 (56%) 13109.m01997 protein expressed protein
TAIR PP10None-----