MLOC_60374 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains246.85189.733226.059220.072
LEAShoots from the seedlings (10 cm shoot stage)96.746109.77108.73187.3989
INF1Young developing inflorescences (5mm)175.928189.725209.698177.476
INF2Developing inflorescences (1-1.5 cm)227.909161.747228.281241.085
ROORoots from the seedlings (10 cm shoot stage)323.554176.716288.697244.643
NODDeveloping tillers at six leaf stage, 3rd internode166.848170.597190.658461.019
CAR5Developing grain, bracts removed (5 DPA)94.368897.322698.4575105.861
CAR15Developing grain, bracts removed (15 DPA)47.259640.410343.1547116.534



CDS Structure of MLOC_60374






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60374.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355751NoneNoneNoneNone
MLOC_60374.1CUST_4281_PI427708080AvailableAvailablecontig_44323 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g49490.1 -2 2e-55 182 101/114 (89%) 13106.m05298 protein ZOS6-10 - C2H2 zinc finger protein, expressed
TAIR PP10 AT3G02790.1 -2 1e-38 137 74/114 (65%) zinc finger (C2H2 type) family protein | chr3:604926-605243 FORWARD LENGTH=105