MLOC_60372 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.637071.664161.472561.25618
LEAShoots from the seedlings (10 cm shoot stage)0.9213250.8137260.8772420.578256
INF1Young developing inflorescences (5mm)4.389134.066695.021562.92711
INF2Developing inflorescences (1-1.5 cm)5.424985.642996.385824.84926
ROORoots from the seedlings (10 cm shoot stage)1.858641.679321.418751.45626
NODDeveloping tillers at six leaf stage, 3rd internode0.9407971.254351.238463.10702
CAR5Developing grain, bracts removed (5 DPA)3.573172.957813.575432.40065
CAR15Developing grain, bracts removed (15 DPA)2.059391.774732.033933.53708



CDS Structure of MLOC_60372






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60372.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376624NoneNoneNoneNone
MLOC_60372.1CUST_4280_PI427708080AvailableAvailablecontig_44321 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g11660.2 -1 3e-85 285 178/396 (45%) 13104.m01061 protein OsFBX119 - F-box domain containing protein, expressed
TAIR PP10 AT3G51050.1 -2 6e-11 63 36/78 (46%) FG-GAP repeat-containing protein | chr3:18954023-18957698 FORWARD LENGTH=698