MLOC_60357 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains541.806341.632404.101361.42
LEAShoots from the seedlings (10 cm shoot stage)202.926174.316257.724148.435
INF1Young developing inflorescences (5mm)161.795166.02213.595144.377
INF2Developing inflorescences (1-1.5 cm)8.619982.9629455.775218.2677
ROORoots from the seedlings (10 cm shoot stage)827.928622.736383.294578.976
NODDeveloping tillers at six leaf stage, 3rd internode532.018183.104130.737386.742
CAR5Developing grain, bracts removed (5 DPA)119.916106.67109.027102.807
CAR15Developing grain, bracts removed (15 DPA)171.341168.179121.945357.595



CDS Structure of MLOC_60357






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60357.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248603.1NoneNoneNoneNone
MLOC_60357.1CUST_4276_PI427708080AvailableAvailablecontig_44310 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g04700.1 +3 3e-12 62 38/40 (95%) 13105.m00483 protein OsRCI2-6 - Hydrophobic protein LTI6B, expressed
TAIR PP10None-----