MLOC_60337 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3114030.17889100.266982
LEAShoots from the seedlings (10 cm shoot stage)000.4231710.37571
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.03346070.08128990.0959972
ROORoots from the seedlings (10 cm shoot stage)4.597931.094971.410071.68224
NODDeveloping tillers at six leaf stage, 3rd internode0.6598580.3711141.009211.31826
CAR5Developing grain, bracts removed (5 DPA)00.08203700.119167
CAR15Developing grain, bracts removed (15 DPA)2.157311.591351.207864.66912



CDS Structure of MLOC_60337






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60337.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60337.1CUST_14116_PI427708080AvailableAvailablecontig_44290 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g25780.1 -2 2e-55 185 160/224 (71%) 13102.m02789 protein expressed protein
TAIR PP10 AT2G45360.1 -2 1e-14 72 36/58 (62%) Protein of unknown function (DUF1442) | chr2:18698619-18699360 FORWARD LENGTH=215