MLOC_60336 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7868810.171570.6507740.480168
LEAShoots from the seedlings (10 cm shoot stage)00.630640.54240.584688
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.1719640.0881010.2727890.173312
NODDeveloping tillers at six leaf stage, 3rd internode0.6929590.2216710.1865430.756175
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_60336






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60336.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60336.1CUST_14115_PI427708080AvailableAvailablecontig_442860 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g04540.1 -2 4e-52 178 91/116 (78%) 13108.m00435 protein decarboxylase, putative, expressed
TAIR PP10 AT4G28680.4 -2 5e-27 108 54/108 (50%) | Symbols: TYRDC | L-tyrosine decarboxylase | chr4:14155184-14158546 FORWARD LENGTH=538