MLOC_60329 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.446813.639042.922733.68468
LEAShoots from the seedlings (10 cm shoot stage)1.821750.4992680.3880230.762329
INF1Young developing inflorescences (5mm)3.094033.428232.816073.09401
INF2Developing inflorescences (1-1.5 cm)2.420742.580312.45673.12128
ROORoots from the seedlings (10 cm shoot stage)4.459774.12183.451335.14633
NODDeveloping tillers at six leaf stage, 3rd internode0.536960.6934790.02225831.67455
CAR5Developing grain, bracts removed (5 DPA)0.1431320.09670870.1363170.136038
CAR15Developing grain, bracts removed (15 DPA)0.114680.1149230.1242470.333202



CDS Structure of MLOC_60329






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60329.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60329.4CUST_14114_PI427708080AvailableAvailablecontig_44283 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g36660.1 -2 0.0 700 338/391 (86%) 13101.m03711 protein carboxyl-terminal peptidase, putative, expressed
TAIR PP10 AT1G70550.2 -2 0.0 580 263/384 (68%) Protein of Unknown Function (DUF239) | chr1:26597675-26599888 FORWARD LENGTH=410