MLOC_60327 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains145.801125.452106.565140.86
LEAShoots from the seedlings (10 cm shoot stage)89.85152.194863.985863.539
INF1Young developing inflorescences (5mm)163.794184.924194.06168.713
INF2Developing inflorescences (1-1.5 cm)154.412171.129185.272205.101
ROORoots from the seedlings (10 cm shoot stage)97.8303114.166118.848156.054
NODDeveloping tillers at six leaf stage, 3rd internode55.650285.3651154.197365.709
CAR5Developing grain, bracts removed (5 DPA)128.178141.157115.215140.525
CAR15Developing grain, bracts removed (15 DPA)34.108331.685834.68784.705



CDS Structure of MLOC_60327






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60327.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248679.1NoneNoneNoneNone
MLOC_60327.1CUST_4273_PI427708080AvailableAvailablecontig_44280 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34180.2 -3 1e-81 249 138/156 (88%) 13110.m03041 protein transcription factor BTF3, putative, expressed
TAIR PP10 AT1G73230.1 -3 2e-71 222 122/156 (78%) Nascent polypeptide-associated complex NAC | chr1:27540506-27541364 REVERSE LENGTH=165