MLOC_60326 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.244392.322422.247982.43216
LEAShoots from the seedlings (10 cm shoot stage)2.181142.775985.59762.81794
INF1Young developing inflorescences (5mm)0.5678580.6381110.6401270.577012
INF2Developing inflorescences (1-1.5 cm)0.17970.2919890.3191970.324824
ROORoots from the seedlings (10 cm shoot stage)12.60797.69128.989289.37987
NODDeveloping tillers at six leaf stage, 3rd internode1.534743.371982.728328.07946
CAR5Developing grain, bracts removed (5 DPA)0.5061350.4911410.4315260.521735
CAR15Developing grain, bracts removed (15 DPA)0.2859450.2050470.4118240.762119



CDS Structure of MLOC_60326






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60326.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365204NoneNoneNoneNone
MLOC_60326.2CUST_4272_PI427708080AvailableAvailablecontig_44280 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34170.1 -1 0.0 967 516/650 (79%) 13110.m03039 protein glutaredoxin domain containing protein, putative, expressed
TAIR PP10 AT3G11920.1 -1 0.0 566 291/539 (54%) glutaredoxin-related | chr3:3772311-3774887 FORWARD LENGTH=630