- Predicted Gene MLOC_60307
MLOC_60307 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.31234 | 6.37312 | 5.2154 | 5.28767 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.36289 | 1.07984 | 1.51735 | 1.42654 |
| INF1 | Young developing inflorescences (5mm) | 29.5525 | 33.3286 | 32.5358 | 25.0066 |
| INF2 | Developing inflorescences (1-1.5 cm) | 40.4318 | 46.6689 | 38.4891 | 43.5553 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.42169 | 5.01725 | 4.26166 | 4.95515 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0557097 | 0.118669 | 0.0918934 | 0.369266 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.88246 | 6.4826 | 5.807 | 5.48503 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.51054 | 0.857395 | 1.45948 | 2.75094 |
CDS Structure of MLOC_60307
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60307.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g12480.1 |
+2 |
0.0 |
622 |
331/522 (63%) |
13104.m01146 protein pumilio-family RNA binding repeat containing protein, expressed |
| TAIR PP10 |
AT2G29190.2 |
+2 |
3e-131 |
421 |
217/415 (52%) |
| Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071 REVERSE LENGTH=972 |