MLOC_60301 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.128981.58181.576361.13914
LEAShoots from the seedlings (10 cm shoot stage)1.638961.22482.240521.15637
INF1Young developing inflorescences (5mm)1.89721.661453.003571.39442
INF2Developing inflorescences (1-1.5 cm)3.269444.544985.198883.60732
ROORoots from the seedlings (10 cm shoot stage)0.3530551.615381.061.19549
NODDeveloping tillers at six leaf stage, 3rd internode1.15962.283221.840644.9219
CAR5Developing grain, bracts removed (5 DPA)1.532062.073572.133921.43647
CAR15Developing grain, bracts removed (15 DPA)0.7976820.7656010.9487341.56654



CDS Structure of MLOC_60301






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60301.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60301.2CUST_8263_PI427708083AvailableAvailablecontig_442621 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g04930.1 +2 1e-37 138 67/77 (87%) 13101.m00460 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT5G58900.1 +2 5e-31 119 59/74 (80%) Homeodomain-like transcriptional regulator | chr5:23783275-23784667 REVERSE LENGTH=288