MLOC_60297 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.140914.025114.419915.1564
LEAShoots from the seedlings (10 cm shoot stage)43.341865.677664.147252.5674
INF1Young developing inflorescences (5mm)1.989281.484681.267971.48659
INF2Developing inflorescences (1-1.5 cm)4.38213.788965.388795.15035
ROORoots from the seedlings (10 cm shoot stage)53.58742.673738.646454.2592
NODDeveloping tillers at six leaf stage, 3rd internode35.354241.789833.1401131.197
CAR5Developing grain, bracts removed (5 DPA)10.01219.6890510.80710.717
CAR15Developing grain, bracts removed (15 DPA)43.342940.887841.6341106.879



CDS Structure of MLOC_60297






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60297.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354942NoneNoneNoneNone
MLOC_60297.1CUST_4270_PI427708080AvailableAvailablecontig_44261 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g11970.1 +2 0.0 811 414/430 (96%) 13103.m01354 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT5G19780.1 +2 0.0 791 401/430 (93%) | Symbols: TUA5 | tubulin alpha-5 | chr5:6687212-6688926 FORWARD LENGTH=450